Datasets¶
Usage¶
We have created a convenient dataset loader. The datasets are automatically downloaded in the save_path. If the data have already been downloaded, the dataset are automatically loaded from the local path.
Each dataset has a graph generator method to convert the raw data to a nx.Graph.
Example¶
import dynamicalab as dlb
data = dlb.plants_pollinators_McCullen1993(save_path="./datas")
G = data.graph()
Bipartites (24 datasets)¶
plants_pollinators(save_path) |
Iterator through all plants pollinators datasets. |
plants_pollinators_Ramirez1992([save_path]) |
Plant pollinators dataset of Ramirez et al., 1992 . |
plants_pollinators_McCullen1993([save_path]) |
Plant pollinators dataset of McCullen C.K., 1993 . |
plants_pollinators_Arroyo1992_I([save_path]) |
Plant pollinators dataset of Arroyo et al., 1982 at elevation I. |
plants_pollinators_Arroyo1992_II([save_path]) |
Plant pollinators dataset of Arroyo et al., 1982 at elevation II. |
plants_pollinators_Arroyo1992_III([save_path]) |
Plant pollinators dataset of Arroyo et al., 1982 at elevation III. |
plants_pollinators_Barrett1987([save_path]) |
Plant pollinators dataset of Barrett & Helenurm, 1987 . |
plants_pollinators_Robsertson1992([save_path]) |
Plant pollinators dataset of Robertson 1992 . |
plants_pollinators_Kaiser2010([save_path]) |
Plant pollinators dataset of Kaiser-Bunbury 2010 . |
plants_pollinators_Petanidou1991([save_path]) |
Plant pollinators dataset of Petanidou 1991 . |
plants_pollinators_Clements1923([save_path]) |
Plant pollinators dataset of Clements 1923 . |
plants_pollinators_Dicks2002I([save_path]) |
Plant pollinators dataset of Dicks 2002 . |
plants_pollinators_Dicks2002II([save_path]) |
Plant pollinators dataset of Dicks 2002 . |
plants_pollinators_Dupont2003([save_path]) |
Plant pollinators dataset of Dupont 2003 . |
plants_pollinators_Elberling1999I([save_path]) |
Plant pollinators dataset of Elberling 1999 . |
plants_pollinators_Elberling1999II([save_path]) |
Plant pollinators dataset of Elberling 1999 . |
plants_pollinators_Olesen2002I([save_path]) |
Plant pollinators dataset of Olesen 2002 . |
plants_pollinators_Olerton2003([save_path]) |
Plant pollinators dataset of Ollerton 2003 . |
plants_pollinators_Hocking1968([save_path]) |
Plant pollinators dataset of Hocking 1968 . |
plants_pollinators_Herrera1988([save_path]) |
Plant pollinators dataset of Herrara 1988 . |
plants_pollinators_Memmott1999([save_path]) |
Plant pollinators dataset of Memmott 1999 . |
plants_pollinators_OlesenUnpublished([save_path]) |
Plant pollinators dataset of Olesen Unpublished. |
plants_pollinators_Inouye1988([save_path]) |
Plant pollinators dataset of Inouye 1988 . |
plants_pollinators_Kevan1970([save_path]) |
Plant pollinators dataset of Kevan 1970 . |
plants_pollinators_Kato1990([save_path]) |
Plant pollinators dataset of Kato 1990 . |
Connectomes (1 dataset)¶
connectomes(save_path) |
Iterator through all connectomes datasets. |
connectomes_CElegansSNAP([save_path]) |
This is a neural network of neurons and synapses in C. |
Food webs (7 datasets)¶
food_webs(save_path) |
Iterator through all food webs datasets. |
food_webs_Angelini_Agostinho_2005([save_path]) |
Food webs of Angelini, R., Agostinho A. |
food_webs_Angelini_et_all_1011([save_path]) |
Food webs of Angelini, R., Aloisio, GR., Carvalho, AR. |
food_webs_Angelini_Velho_2011([save_path]) |
Food webs of Angelini, R., Velho, VF. |
food_webs_Angelini_et_all_2006([save_path]) |
Food webs of Angelini, R,. |
food_webs_Torres_et_all_2013([save_path]) |
Food webs of Torres MA., Coll M., Heymans JJ., Christensen V,. |
food_webs_Escalona_et_all_2007([save_path]) |
Food webs of Cruz-Escalona, V.H., Arrequin-Sanchez, F., Zetina-Rejon, M. |
food_webs_Christian_Luczkovich_1999([save_path]) |
Food webs of Christian, RR., Luczkovich JJ. |
food_webs_Bascompte_et_all_2005([save_path]) |
Food webs of J. |
food_webs_Angelini_et_all_2013([save_path]) |
Food webs of Angelini, R., Morais, R., Catella AC., Resende KE., Libralato, S. |
food_webs_Angelini_et_all_2013([save_path]) |
Food webs of Angelini, R., Morais, R., Catella AC., Resende KE., Libralato, S. |
food_webs_Thompson_and_Townsend_2003([save_path]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_01([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_02([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_04([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_05([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_06([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2003_07([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Townsend_et_all_1998_01([save_path]) |
Food webs of Townsend, R. |
food_webs_Townsend_et_all_1998_02([save_path]) |
Food webs of Townsend, R. |
food_webs_Townsend_et_all_1998_03([save_path]) |
Food webs of Townsend, R. |
food_webs_Townsend_et_all_1998_04([save_path]) |
Food webs of Townsend, R. |
food_webs_Thompson_and_Townsend_2000_01([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2000_02([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2000_03([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Thompson_and_Townsend_2000_04([…]) |
Food webs of Thompson, R., Townsend, C. |
food_webs_Baeta_et_all_2011_01([save_path]) |
Food webs of Baeta, A. |